pcaScatterMatrix: Make scatter matrix from PCA scores

In taylo5jm/interactions: Classification of gene expression profile sets generated from combination stimuli

Description

Make scatter matrix from PCA scores

Usage

pcaScatterMatrix(modes, log.fc)

Arguments

modes	character vector of length n indicating the modes of genes 1:n
log.fc	matrix of log fold changes where ncol(log.fc) == 4 if pipeline == "limma" and ncol(log.fc) == 6 if pipeline == "edgeR"

Value

PCA scatter matrix generated with GGally::ggpairs

Examples

library(GGally)
## Not run: 
scatter_matrix <- pcaScatterMatrix(limma_modes, logfc)

## End(Not run)

taylo5jm/interactions documentation built on May 31, 2019, 3:57 a.m.