API for tchitchek-lab/SPADEVizR
SPADEVizR: an R package for Visualization, Analysis and Integration of SPADE results
| Global functions | |
|---|---|
| AC | Man page |
| AC-class | Man page |
| AP | Man page |
| AP-class | Man page |
| CC | Man page |
| CC-class | Man page |
| DAC | Man page |
| DAC-class | Man page |
| MDSViewer | Man page |
| Results | Man page |
| Results-class | Man page |
| abundantClustersViewer | Man page Source code |
| annotateClusters | Man page Source code |
| assignContext | Man page |
| assignContext,Results-method | Man page |
| biplotViewer | Man page |
| boxplotViewer | Man page |
| buildCircles | Source code |
| buildCirclesLegend | Source code |
| circlesPackingViewer | Man page |
| classifyAbundanceProfiles | Man page Source code |
| computeEigenCellClusters | Source code |
| computeHierarchicalClustering | Source code |
| computeKmeans | Source code |
| computePhenoTable | Source code |
| computeQuantile | Source code |
| computeQuantile.approximation | Source code |
| computemode | Source code |
| correlatedClustersViewer | Man page |
| countViewer | Man page |
| createReport | Man page Source code |
| distogramViewer | Man page |
| exclude.markers | Source code |
| export | Man page |
| export,AC-method | Man page |
| export,AP-method | Man page |
| export,CC-method | Man page |
| export,DAC-method | Man page |
| export,Results-method | Man page |
| generateCPHM | Man page Source code |
| generateGLM | Man page Source code |
| generateRFM | Man page Source code |
| ggcolors | Source code |
| ggdendrogram | Source code |
| ggextract | Source code |
| ggheatmap | Source code |
| ggheatmap.combine | Source code |
| heatmapViewer | Man page |
| identifyAC | Man page Source code |
| identifyCC | Man page Source code |
| identifyDAC | Man page Source code |
| importResultsFromCLR.ACS | Man page Source code |
| importResultsFromCLR.CSV | Man page Source code |
| importResultsFromFCS | Man page Source code |
| importResultsFromSPADE | Man page |
| importResultsFromTables | Man page Source code |
| kineticsViewer | Man page |
| load.flowSet | Man page |
| mergeClusters | Man page Source code |
| phenoViewer | Man page |
| plot | Man page |
| plot,AC,missing-method | Man page |
| plot,AP,missing-method | Man page |
| plot,CC,missing-method | Man page |
| plot,DAC,missing-method | Man page |
| plot,Results,missing-method | Man page |
| Man page | |
| print,AC-method | Man page |
| print,AP-method | Man page |
| print,CC-method | Man page |
| print,DAC-method | Man page |
| print,Results-method | Man page |
| qcSmallClusters | Man page Source code |
| qcUniformClusters | Man page |
| removeClusters | Man page Source code |
| removeFactors | Source code |
| rename.markers | Source code |
| show | Man page |
| show,AC-method | Man page |
| show,AP-method | Man page |
| show,CC-method | Man page |
| show,DAC-method | Man page |
| show,Results-method | Man page |
| streamgraphViewer | Man page |
| treeViewer | Man page |
| unload.flowSet | Man page |
| unload.flowSet,Results-method | Man page |
| volcanoViewer | Man page |
