getSsrGenosFromPlantGrapePdf: SSR genotypes from PlantGrape
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
getSsrGenosFromPlantGrapePdf R Documentation
SSR genotypes from PlantGrape
Description
Extract SSR genotypes from a PDF produced by PlantGrape for a given grape variety.
Usage
getSsrGenosFromPlantGrapePdf(file, var.name, sep = "/")
Arguments
file
path to the PDF file
var.name
name of the grape variety
sep
character to use to separate both alleles of a given SSR
Value
matrix with one row and as many columns as SSRs, usable by "df2genind" from the "adegenet" package
Author(s)
Timothee Flutre
timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.
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| getSsrGenosFromPlantGrapePdf | R Documentation |
SSR genotypes from PlantGrape
Description
Extract SSR genotypes from a PDF produced by PlantGrape for a given grape variety.
Usage
getSsrGenosFromPlantGrapePdf(file, var.name, sep = "/")
Arguments
file |
path to the PDF file |
var.name |
name of the grape variety |
sep |
character to use to separate both alleles of a given SSR |
Value
matrix with one row and as many columns as SSRs, usable by "df2genind" from the "adegenet" package
Author(s)
Timothee Flutre
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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