haplosAlleles2num: Haplotypes
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
haplosAlleles2num R Documentation
Haplotypes
Description
Reformat haplotypes from alleles as string into numeric.
Usage
haplosAlleles2num(haplos, alleles, nb.cores = 1)
Arguments
haplos
matrix with haplotypes in rows (2 consecutive per genotype) and SNPs in columns
alleles
data.frame with SNPs in rows (names as row names) and alleles in 2 columns
nb.cores
the number of cores to use, i.e. at most how many child processes will be run simultaneously (not on Windows)
Value
matrix with 0 for the first-column alleles and 1 for the second-column alleles
Author(s)
Timothee Flutre
See Also
segSites2allDoses
timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.
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| haplosAlleles2num | R Documentation |
Haplotypes
Description
Reformat haplotypes from alleles as string into numeric.
Usage
haplosAlleles2num(haplos, alleles, nb.cores = 1)
Arguments
haplos |
matrix with haplotypes in rows (2 consecutive per genotype) and SNPs in columns |
alleles |
data.frame with SNPs in rows (names as row names) and alleles in 2 columns |
nb.cores |
the number of cores to use, i.e. at most how many child processes will be run simultaneously (not on Windows) |
Value
matrix with 0 for the first-column alleles and 1 for the second-column alleles
Author(s)
Timothee Flutre
See Also
segSites2allDoses
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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