mummer2granges | R Documentation |
Convert a data.frame containing alignments coordinates from MUMmer into a GRanges object.
mummer2granges(coords)
coords |
data.frame with 13 columns (see |
GRanges
Timothee Flutre
loadMummer
## Not run: ## MUMmer should be run beforehand, see the example of `loadMummer`:
coords <- loadMummer("out-nucmer_filter_coords.txt.gz", asGRanges=FALSE)
coords.gr <- mummer2granges(coords)
## End(Not run)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.