parseCgPwMatrix: Parse CarthaGene's output

In timflutre/rutilstimflutre: Timothee Flutre's personal R code

Parse CarthaGene's output

Description

Parse the output of CarthaGene's commands "mrkfr2p" or "mrklod2p" or "mrkdist2p".

Usage

parseCgPwMatrix(out, cmd = "mrkfr2p", mrk.info = NULL, verbose = 1)

Arguments

out	vector of character output from runCarthagene corresponding to "mrkfr2p" or "mrklod2p" or "mrkdist2p"
cmd	"mrkfr2p" or "mrklod2p" or "mrkdist2p"
mrk.info	data frame output from parseCgMrkinfo (optional; useful to have the marker names as row and column names in the returned matrix)
verbose	verbosity level (0/1)

Value

matrix

Author(s)

Timothee Flutre

timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.