readHaplosFastphase: Read haplotypes from fastPHASE
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
readHaplosFastphase R Documentation
Read haplotypes from fastPHASE
Description
Extract the haplotypes from fastPHASE's output files ("hapguess_switch" and "hapguess_indiv").
Usage
readHaplosFastphase(file, snp.ids)
Arguments
file
character
snp.ids
vector of SNP identifiers
Value
matrix with haplotypes in rows (2 per genotype) and SNPs in columns
Author(s)
Timothee Flutre
timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.
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| readHaplosFastphase | R Documentation |
Read haplotypes from fastPHASE
Description
Extract the haplotypes from fastPHASE's output files ("hapguess_switch" and "hapguess_indiv").
Usage
readHaplosFastphase(file, snp.ids)
Arguments
file |
character |
snp.ids |
vector of SNP identifiers |
Value
matrix with haplotypes in rows (2 per genotype) and SNPs in columns
Author(s)
Timothee Flutre
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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