reformatGenoClasses | R Documentation |
Reformat bi-allelic SNP genotypes encoded in genotypic classes to ease subsequent manipulations.
reformatGenoClasses(
file = NULL,
x = NULL,
na.string = "--",
sep = "",
verbose = 1
)
file |
the name of the file which the data are to be read from, with a header line, columns separated by a tabulation, and row names as the first column |
x |
if |
na.string |
a character to be interpreted as NA values |
sep |
separator of alleles within each SNP genotype to be removed |
verbose |
verbosity level (0/1) |
matrix with SNPs in rows and genotypes in columns
Eric Duchene [aut], Timothee Flutre [ctb]
genoClasses2genoDoses
, genoClasses2JoinMap
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