subsetVcfOnAllelicity: Parse VCF
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
subsetVcfOnAllelicity R Documentation
Parse VCF
Description
Returns a VCF object subsetted for allelicity.
Usage
subsetVcfOnAllelicity(vcf, single.ref = TRUE, single.alt = TRUE)
Arguments
vcf
CollapsedVCF (see pkg VariantAnnotation)
single.ref
if TRUE, only records with a single 'ref' are kept
single.alt
if TRUE, only records with a single 'alt' are kept
Value
CollapsedVCF
Author(s)
Gautier Sarah, Timothee Flutre
timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.
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| subsetVcfOnAllelicity | R Documentation |
Parse VCF
Description
Returns a VCF object subsetted for allelicity.
Usage
subsetVcfOnAllelicity(vcf, single.ref = TRUE, single.alt = TRUE)
Arguments
vcf |
CollapsedVCF (see pkg VariantAnnotation) |
single.ref |
if TRUE, only records with a single 'ref' are kept |
single.alt |
if TRUE, only records with a single 'alt' are kept |
Value
CollapsedVCF
Author(s)
Gautier Sarah, Timothee Flutre
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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