writeSnpInfoFindhap: Write SNP information for findhap

In timflutre/rutilstimflutre: Timothee Flutre's personal R code

Write SNP information for findhap

Description

Write SNP information into a file formatted for findhap.

Usage

writeSnpInfoFindhap(snp.coords, snp.info.file)

Arguments

snp.coords	data.frame with SNP identifiers as row names, and two compulsory columns in that order, chromosome identifiers and coordinate/position identifiers; chromosome identifiers should be numeric (the highest number for X-specific SNPs, Y-specific SNPs being unsupported); the "within" and "overall" columns will be added, as well as "n_chips" and "chip1" if there is a single microarray
snp.info.file	path to the file in which SNP information will be saved

Value

nothing

Author(s)

Timothee Flutre

timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.