Description Usage Arguments Value Author(s) See Also Examples
In the specified CytoscapeConnection, stipulate the default color for all edge source arrows other than those mentioned in an edge source arrow color rule.
1 | setDefaultEdgeSourceArrowColor(obj, new.color, vizmap.style.name = "default")
|
obj |
a |
new.color |
a |
vizmap.style.name |
a |
None.
Tanja Muetze, Georgi Kolishovski, Paul Shannon
setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setDefaultEdgeFontSize setEdgeColorRule
1 2 3 4 5 6 7 8 9 10 11 12 | ## Not run:
# first, delete existing windows to save memory:
deleteAllWindows(CytoscapeConnection())
cw <- CytoscapeWindow ('setDefaultEdgeSourceArrowColor test', graph=makeSimpleGraph())
displayGraph (cw)
layoutNetwork(cw, 'force-directed')
setDefaultEdgeSourceArrowColor (cw, '#F0F0F0')
setEdgeSourceArrowShapeDirect (cw, c('A (phosphorylates) B', 'B (synthetic lethal) C'), 'DIAMOND')
# redraw (cw) --> not required anymore
## End(Not run)
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