setNodeBorderOpacityDirect: setNodeBorderOpacityDirect

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

In the specified CytoscapeWindow, set the opacity of the border of the specified node(s).

Usage

setNodeBorderOpacityDirect(obj, node.names, new.values)

Arguments

obj	a CytoscapeWindowClass object.
node.names	one or more String objects.
new.values	a numeric object, ranging from 0 to 255.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

setNodeBorderColorRule (detailed example) setNodeBorderColorDirect setNodeBorderWidthDirect setNodeColorDirect setNodeFillOpacityDirect setNodeFontSizeDirect setNodeHeightDirect setNodeImageDirect setNodeLabelColorDirect setNodeLabelDirect setNodeLabelOpacityDirect setNodeOpacityDirect setNodeShapeDirect setNodeSizeDirect

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setNodeBorderOpacityDirect.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'force-directed')
  setDefaultNodeBorderWidth (cw, 5)
  setNodeBorderOpacityDirect (cw, 'A', 220)
  setNodeBorderOpacityDirect (cw, c('B', 'C'), c(22, 55))

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.