Description Usage Arguments Value Author(s) See Also Examples
Specify the node attribute which controls the thickness of the node borders displayed in the graph. This is currently only a lookup mapping. An interpolated mapping will be added in the future.
1 2 | setNodeBorderWidthRule(obj, node.attribute.name, attribute.values, line.widths,
default.width, vizmap.style.name = 'default')
|
obj |
a |
node.attribute.name |
the node attribute whose values will determine the width of the node border on each node when this rule is applied. |
attribute.values |
observed values of the specified attribute on the nodes. |
line.widths |
the corresponding widths. |
default.width |
use this where the rule fails to apply |
vizmap.style.name |
visual style name, defaults to the style 'default'. |
None.
Tanja Muetze, Georgi Kolishovski, Paul Shannon
setNodeBorderColorRule (detailed example) getVisualstyleNames
1 2 3 4 5 6 7 8 9 10 11 12 | ## Not run:
# first, delete existing windows to save memory:
deleteAllWindows(CytoscapeConnection())
cw <- CytoscapeWindow ('setNodeBorderWidthRule.test', graph=makeSimpleGraph())
displayGraph (cw)
layoutNetwork (cw, 'force-directed')
node.attribute.values <- c('kinase', 'transcription factor', 'glycoprotein')
line.widths <- c(0, 8, 16)
setNodeBorderWidthRule (cw, 'type', node.attribute.values, line.widths)
## End(Not run)
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