API for topherconley/spacemap
A novel conditional graphical model for integrative genomics

Global functions
Beta.coef Source code
GenCov Source code
GenPar Source code
Hub.net Source code
InvSig.diag.new Source code
InvSig.diag.old Source code
OLS.CV Source code
RSS.CV Source code
RanGra Source code
adj2igraph Man page Source code
adjacency Man page Source code
algoFDR Man page Source code
algoMCC Man page Source code
algoPower Man page Source code
averageScores Source code
bcpls Man page
bicCondLike Man page Source code
bicLike Man page Source code
bicRSS Source code
bootEnsemble Man page Source code
bootVote Man page Source code
calcThetaXY Source code
calcThetaYY Source code
cisTrans Man page Source code
conc2parcor Source code
cov2ParCor Source code
cvPerf Man page Source code
cvVote Man page Source code
cvVoteRDS Source code
dataPart Source code
doRemMap Source code
doSpace Source code
doSpaceMap Source code
formatPerf Source code
gInvSig.diag.new Source code
gaussCondLogLik Source code
gaussLogLik Source code
getModuleInfo Source code
hypergeoTest Source code
initFit Man page Source code
jsrm Source code
layerInfo Source code
minScoreIndex Source code
modEnrich Man page Source code
mods2list Source code
nonZeroUpper Man page Source code
nonZeroWhole Man page Source code
olsRefitSpace Source code
olsRefitSpacemap Source code
rankHub Man page Source code
remMap Source code
remMap.BIC Source code
remMap.CV Source code
remMap.df Source code
renderModuleTable Source code
reportHubs Man page Source code
reportJointPerf Man page Source code
reportPerf Man page Source code
setCisTransDistr Source code
setGOTags Source code
sim1 Man page
space Man page Source code
space.nested Source code
spacemap Man page Source code
sparseAdjMat Source code
splitEdgeVector Source code
structureScores Source code
testModel Source code
testSpace Source code
testSpacemap Source code
trainModel Source code
tuneVis Man page Source code
variTrainParam Source code
varySpaceMapParam Source code
xHubEnrich Man page Source code
topherconley/spacemap documentation built on June 23, 2017, 7:51 a.m.