uc-bd2k/CLEAN: Clustering Enrichment Analysis

Given an hierarchical gene clustering and a list of functional categories, this package performs functional enrichment analysis of all possible clusters and generates files to simultaneously display gene expression data, gene clustering, sample clustering, and functional annotation of gene clustering.

Getting started

Package details

AuthorJohannes Freudenberg, Zhen Hu, Xiangdong Liu, Mario Medvedovic
MaintainerMario Medvedovic <[email protected]>
LicenseGPL (>= 2)
Version1.3.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("uc-bd2k/CLEAN")
uc-bd2k/CLEAN documentation built on Sept. 9, 2017, 10:22 p.m.