plot_bnd_sr_pr_tot_lines: Line plot for SR, PR and SR + PR for BNDs

Description Usage Arguments Value Examples

Description

Plots the number of split reads (SR), paired end reads (PR), and their sum (tot) across all BNDs, sorted by tot.

Usage

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plot_bnd_sr_pr_tot_lines(
  d,
  title = "SR, PR and SR + PR line plot for BNDs",
  subtitle = "Events are sorted by decreasing tot values."
)

Arguments

d

A data.frame with an SR_PR_alt column.

title

Main title of plot.

subtitle

Subtitle of plot.

Value

A ggplot2 plot object.

Examples

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x <- system.file("extdata/umccrise/sv/manta.tsv", package = "gpgr")
d <- process_sv(x)$unmelted
plot_bnd_sr_pr_tot_lines(d)

umccr/gpgr documentation built on Nov. 25, 2021, 1:15 p.m.