plot_bnd_sr_pr_tot_lines: Line plot for SR, PR and SR + PR for BNDs
In umccr/gpgr: Genomics Platform Group Reporting
plot_bnd_sr_pr_tot_lines R Documentation
Line plot for SR, PR and SR + PR for BNDs
Description
Plots the number of split reads (SR), paired end reads (PR), and their
sum (tot) across all BNDs, sorted by tot.
Usage
plot_bnd_sr_pr_tot_lines(
d,
title = "SR, PR and SR + PR line plot for BNDs",
subtitle = "Events are sorted by decreasing tot values."
)
Arguments
d
A data.frame with an SR_PR_alt column.
title
Main title of plot.
subtitle
Subtitle of plot.
Value
A ggplot2 plot object.
Examples
x <- system.file("extdata/sash/sv.prioritised.tsv", package = "gpgr")
d <- process_sv(x)$map
plot_bnd_sr_pr_tot_lines(d)
umccr/gpgr documentation built on Nov. 28, 2024, 10:16 a.m.
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| plot_bnd_sr_pr_tot_lines | R Documentation |
Line plot for SR, PR and SR + PR for BNDs
Description
Plots the number of split reads (SR), paired end reads (PR), and their
sum (tot) across all BNDs, sorted by tot.
Usage
plot_bnd_sr_pr_tot_lines(
d,
title = "SR, PR and SR + PR line plot for BNDs",
subtitle = "Events are sorted by decreasing tot values."
)
Arguments
d |
A data.frame with an SR_PR_alt column. |
title |
Main title of plot. |
subtitle |
Subtitle of plot. |
Value
A ggplot2 plot object.
Examples
x <- system.file("extdata/sash/sv.prioritised.tsv", package = "gpgr")
d <- process_sv(x)$map
plot_bnd_sr_pr_tot_lines(d)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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