process_sv: Process Structural Variants

Description Usage Arguments Value Examples

View source: R/sv.R

Description

Processes the Manta TSV file output by umccrise.

Usage

1

Arguments

x

Path to manta.tsv output by umccrise.

Value

A list with melted/unmelted tibbles (these are NULL if TSV file was empty).

Examples

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x <- system.file("extdata/umccrise/sv/manta.tsv", package = "gpgr")
(sv <- process_sv(x))

umccr/gpgr documentation built on Nov. 25, 2021, 1:15 p.m.