virusbreakend_vcf_read: Read VIRUSBreakend VCF File

View source: R/oncoviral.R

virusbreakend_vcf_readR Documentation

Read VIRUSBreakend VCF File

Description

Reads the virusbreakend.vcf file and selects data to present.

Usage

virusbreakend_vcf_read(x)

Arguments

x

Path to virusbreakend.vcf file.

Value

List with two elements:

  • tab: Tibble containing selected data.

  • descr: Description of tibble columns.

Examples

x <- system.file("extdata/virusbreakend/virusbreakend.vcf", package = "gpgr")
(vb <- virusbreakend_vcf_read(x))

umccr/gpgr documentation built on April 21, 2024, 1:16 a.m.