purple_cnv_som_read: Read PURPLE CNV Somatic File

View source: R/purple.R

purple_cnv_som_readR Documentation

Read PURPLE CNV Somatic File

Description

Reads the purple.cnv.somatic.tsv file, which contains the copy number profile of all (contiguous) segments of the tumor sample (see this table).

Usage

purple_cnv_som_read(x)

Arguments

x

Path to purple.cnv.somatic.tsv file.

Value

The input file as a tibble.

Examples

x <- system.file("extdata/purple/purple.cnv.somatic.tsv", package = "gpgr")
(p <- purple_cnv_som_read(x))

umccr/gpgr documentation built on Aug. 24, 2023, 10:06 p.m.