purple_cnv_som_read: Read PURPLE CNV Somatic File

Description Usage Arguments Value Examples

View source: R/purple.R

Description

Reads the purple.cnv.somatic.tsv file, which contains the copy number profile of all (contiguous) segments of the tumor sample (see this table).

Usage

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Arguments

x

Path to purple.cnv.somatic.tsv file.

Value

The input file as a tibble.

Examples

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x <- system.file("extdata/purple/purple.cnv.somatic.tsv", package = "gpgr")
(p <- purple_cnv_som_read(x))

umccr/gpgr documentation built on Nov. 25, 2021, 1:15 p.m.