get_genomic_coordinates: Get SingleCellExperiment's genomic coordinates
In vallotlab/ChromSCape: Analysis of single-cell epigenomics datasets with a Shiny App
View source: R/preprocessing_filtering_reduction.R
get_genomic_coordinates R Documentation
Get SingleCellExperiment's genomic coordinates
Description
Get SingleCellExperiment's genomic coordinates
Usage
get_genomic_coordinates(scExp)
Arguments
scExp
A SingleCellExperiment object.
Value
A GRanges object of genomic coordinates.
Examples
raw <- create_scDataset_raw()
scExp = create_scExp(raw$mat, raw$annot)
feature_GRanges = get_genomic_coordinates(scExp)
vallotlab/ChromSCape documentation built on Oct. 15, 2023, 1:47 p.m.
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View source: R/preprocessing_filtering_reduction.R
| get_genomic_coordinates | R Documentation |
Get SingleCellExperiment's genomic coordinates
Description
Get SingleCellExperiment's genomic coordinates
Usage
get_genomic_coordinates(scExp)
Arguments
scExp |
A SingleCellExperiment object. |
Value
A GRanges object of genomic coordinates.
Examples
raw <- create_scDataset_raw()
scExp = create_scExp(raw$mat, raw$annot)
feature_GRanges = get_genomic_coordinates(scExp)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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