has_genomic_coordinates: Does SingleCellExperiment has genomic coordinates in features...

View source: R/preprocessing_filtering_reduction.R

has_genomic_coordinatesR Documentation

Does SingleCellExperiment has genomic coordinates in features ?

Description

Does SingleCellExperiment has genomic coordinates in features ?

Usage

has_genomic_coordinates(scExp)

Arguments

scExp

A SingleCellExperiment object

Value

TRUE or FALSE

Examples


raw <- create_scDataset_raw()
scExp = create_scExp(raw$mat, raw$annot)
has_genomic_coordinates(scExp)
raw_genes = create_scDataset_raw(featureType="gene")
scExp_gene = create_scExp(raw_genes$mat, raw_genes$annot)
has_genomic_coordinates(scExp_gene)


vallotlab/ChromSCape documentation built on Oct. 15, 2023, 1:47 p.m.