read_count_mat_with_separated_chr_start_end: Read a count matrix with three first columns (chr,start,end)

View source: R/preprocessing_filtering_reduction.R

read_count_mat_with_separated_chr_start_endR Documentation

Read a count matrix with three first columns (chr,start,end)

Description

Read a count matrix with three first columns (chr,start,end)

Usage

read_count_mat_with_separated_chr_start_end(
  path_to_matrix,
  format_test,
  separator
)

Arguments

path_to_matrix

Path to the count matrix

format_test

Sample of the read.table

separator

Separator character

Value

A sparseMatrix with rownames in the form "chr1:1222-55555"


vallotlab/ChromSCape documentation built on Oct. 15, 2023, 1:47 p.m.