pcr_sequences: In silico amplification
In vaulot/dvutils: A set of utilities
Description
Usage
Arguments
Value
Examples
Description
Returns start end end of the primer. If there are more than one matches, return the first match and the number of matches
Usage
1
pcr_sequences(fwd_seq, rev_seq, target_seq, mismatches = 0)
Arguments
fwd_seq
forward primer sequence
rev_seq
reverse primer sequence
target_seq
target sequences (vector)
mismatches
Number of mismatches allowed
Value
vector with the amplicon or NA if no matches
Examples
1
pcr_sequences("ATT","CCC", c("ATTTTCGGG", "AGTTTCGGG"), mismatches=0)
vaulot/dvutils documentation built on Nov. 20, 2021, 11:01 a.m.
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Description Usage Arguments Value Examples
Description
Returns start end end of the primer. If there are more than one matches, return the first match and the number of matches
Usage
1 | pcr_sequences(fwd_seq, rev_seq, target_seq, mismatches = 0)
|
Arguments
fwd_seq |
forward primer sequence |
rev_seq |
reverse primer sequence |
target_seq |
target sequences (vector) |
mismatches |
Number of mismatches allowed |
Value
vector with the amplicon or NA if no matches
Examples
1 | pcr_sequences("ATT","CCC", c("ATTTTCGGG", "AGTTTCGGG"), mismatches=0)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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