TPRQTLmodelMPP: TPR for QTL x model x MPP combination

In vincentgarin/mppSim: Functions for simulation in MPP

TPR for QTL x model x MPP combination

Description

Computes and organises the TPR results for each combination of QTL, model, and MPP design. The TPR is averaged over the repetitions. The function returns the average and the standard deviation of the TPR for a specific combination of QTL model and MPP design.

Usage

TPRQTLmodelMPP(
  QTL_true,
  QTL_detected,
  d_QTL,
  n_des = 9,
  n_mod = 4,
  n_QTL = 8,
  mod_names = c("cr", "par", "anc", "biall"),
  MPP_names = NULL
)

Arguments

QTL_true	list of true QTL positions.
QTL_detected	list results of detected QTLs.
d_QTL	distance to the QTL.
n_des	Number of MPP design. Default = 9.
n_mod	Number of QTL detection models. Default = 4.
n_QTL	Number of QTL. Default = 8.
mod_names	Models names. Default = c("cr", "par", "anc", "biall").
MPP_names	MPP design names.

Value

A matrix with the precentage of detection over the repetition of the simulation procedure.

Author(s)

Vincent Garin

vincentgarin/mppSim documentation built on Oct. 11, 2024, 3:18 p.m.