formMppData2: Form mppData object
In vincentgarin/mppSim: Functions for simulation in MPP

formMppData2

R Documentation

Form mppData object

Description

Function that subset a global population composed from all the cross of a Dialleld structure and form mppData object for realisation of particular MPP design.

Usage

formMppData2(
  geno_sim,
  nPar,
  map,
  MPP_sub,
  pheno,
  type = NULL,
  F.gen = NULL,
  BC.gen = NULL,
  window = 20
)

Arguments

`geno_sim`	genotype matrix of the global population.
`nPar`	Number of parents in the original diallel.
`map`	Correspondig three column genetic map (mk.id, chr, pos cM).
`MPP_sub`	subset information obtained as output of the function `SampleMPPDesign2`.
`pheno`	Simulated phenotype values.
`type`	Type of population.
`F.gen`	Number of F generations.
`BC.gen`	Number of BC generations.
`window`	size of the window used by clusthaplo to cluster the parents.