TPRmodelQTL: TPR for model x QTL combination
In vincentgarin/mppSim: Functions for simulation in MPP

TPRmodelQTL

R Documentation

TPR for model x QTL combination

Description

Computes and organises the TPR results for each combination of model and type of QTL. The TPR is averaged over the repetition and MPP design. The function returns the percentage of time a specific type of QTL effect was detected by a specific model over a number of repetitions and MPP design sampling.

Usage

TPRmodelQTL(
  QTL_true,
  QTL_detected,
  d_QTL,
  n_des = 9,
  n_mod = 4,
  n_QTL = 8,
  mod_names = c("cr", "par", "anc", "biall")
)

Arguments

`QTL_true`	list of true QTL positions.
`QTL_detected`	list results of detected QTLs.
`d_QTL`	distance to the QTL.
`n_des`	Number of MPP design. Default = 9.
`n_mod`	Number of QTL detection models. Default = 4.
`n_QTL`	Number of QTL. Default = 8.
`mod_names`	Models names. Default = c("cr", "par", "anc", "biall").