formMppData: Form mppData objects
In vincentgarin/mppSim: Functions for simulation in MPP

formMppData

R Documentation

Form mppData objects

Description

Function that subset a global population composed from all the cross of a Dialleld structure between 9 parents to for mppData objects. The function start from a particular realization (global population) composed of 5000 markers.

Usage

formMppData(
  geno_ABH,
  geno_012,
  map,
  MPP_sub,
  mk_prob,
  pheno,
  type = "F",
  nb_gen = 2
)

Arguments

`geno_ABH`	genotype matrix of the global population in ABH format.
`geno_012`	genotype matrix of the global population in 012 format.
`map`	Correspondig three column genetic map (mk.id, chr, pos cM).
`MPP_sub`	subset information obtained as output of the function `SampleMPPDesign`.
`mk_prob`	Problematic markers in the subset of the global population
`pheno`	Simulated phenotype values.
`type`	Type of population. Default = "F"
`nb_gen`	Number of generation. Default = 2.