API for waldronlab/BugSigDBStats
BugSigDB Stats and Analysis
| Global functions | |
|---|---|
| .bugSigDBExportToSig | Source code |
| .cacheResource | Source code |
| .cooc | Source code |
| .createResultTable | Source code |
| .first | Source code |
| .getCategoriesToTest | Source code |
| .getNrCommonSignatures | Source code |
| .getResourceFromCache | Source code |
| .getShortName | Source code |
| .largest | Source code |
| .merge | Source code |
| .restrictByDirection | Source code |
| .summarizeDiv | Source code |
| .testCondition | Source code |
| .testConditions | Source code |
| .treatMultiContrastStudies | Source code |
| calcJaccardSimilarity | Man page Source code |
| calcPairwiseOverlaps | Man page Source code |
| calcSemanticSimilarity | Man page Source code |
| getMostFrequentTaxa | Man page Source code |
| getNcbiTaxonomyObo | Man page Source code |
| getTaxLevelDistribution | Man page Source code |
| getTaxonStats | Man page Source code |
| makeDist | Man page Source code |
| microbeHeatmap | Man page Source code |
| paperStat | Man page Source code |
| plotComposition | Man page Source code |
| plotCuratorStats | Man page Source code |
| plotProgressOverTime | Man page Source code |
| plotUniqueMicrobesOverTime | Man page Source code |
| pmid2pubyear | Man page Source code |
| sigStat | Man page Source code |
| stratifyByCurator | Man page Source code |
| stripEmptySignatures | Man page Source code |
| syncWithNCBI | Man page Source code |
| tabCol | Man page Source code |
| tabDiv | Man page Source code |
| testAssociation | Man page Source code |
| testReplicability | Man page Source code |
| weightedBMA | Man page Source code |
