Files in waldronlab/BugSigDBStats
BugSigDB Stats and Analysis
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/calcJaccardSimilarity.R
R/calcPairwiseOverlaps.R
R/calcSemanticSimilarity.R
R/curation_contents.R
R/curation_handling.R
R/curation_viz.R
R/utils.R
README.md
_pkgdown.yml
inst/scripts/semsim.html
man/calcJaccardSimilarity.Rd
man/calcPairwiseOverlaps.Rd
man/calcSemanticSimilarity.Rd
man/getMostFrequentTaxa.Rd
man/getNcbiTaxonomyObo.Rd
man/getTaxLevelDistribution.Rd
man/getTaxonStats.Rd
man/makeDist.Rd
man/microbeHeatmap.Rd
man/paperStat.Rd
man/plotComposition.Rd
man/plotCuratorStats.Rd
man/plotProgressOverTime.Rd
man/plotUniqueMicrobesOverTime.Rd
man/pmid2pubyear.Rd
man/sigStat.Rd
man/stratifyByCurator.Rd
man/stripEmptySignatures.Rd
man/syncWithNCBI.Rd
man/tabCol.Rd
man/tabDiv.Rd
man/testAssociation.Rd
man/testReplicability.Rd
man/weightedBMA.Rd
tests/testthat.R
tests/testthat/test-calcPairwiseOverlaps.R
tests/testthat/test-replicability.R
vignettes/BugSigDBStats.Rmd
