API for wgmao/PLIER
Pathway-Level Information Extractor (PLIER): a generative model for gene expression data

Global functions
AUC Source code
BH Source code
CTNNB1mut Man page
DataSmooth Man page Source code
HCCData Man page
PLIER Man page Source code
QV Source code
SPVs Man page
bloodCellMarkersIRISDMAP Man page
canonicalPathways Man page
chemgenPathways Man page
colSumNorm Source code
combinePaths Man page Source code
commonRows Man page Source code
computeChat Man page Source code
copyMat Source code
crossVal Source code
getAUC Source code
getCutoff Man page Source code
immunePathways Man page
mapPathway Man page Source code
mydist Source code
nameB Man page Source code
nonEstimable Source code
num.pc Man page Source code
oncogenicPathways Man page
pinv.ridge Source code
plierResToMarkers Man page Source code
plotMat Man page Source code
plotTopZ Man page Source code
plotTopZallPath Man page Source code
plotU Man page Source code
resid Source code
rowNorm Man page Source code
svmMarkers Man page
tscale Source code
vacData Man page
wrapString Source code
wgmao/PLIER documentation built on Oct. 20, 2018, 4:13 p.m.