Files in wgmao/PLIER
Pathway-Level Information Extractor (PLIER): a generative model for gene expression data

.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
R/Allfuncs.R R/funcs.R README.md
data/CTNNB1mut.rda
data/HCCdata.rda
data/SPVs.rda
data/bloodCellMarkersIRISDMAP.rda
data/canonicalPathways.rda
data/cellsUsoskin.rda
data/chemgenPathways.rda
data/dataUsoskin.rda
data/dataWholeBlood.rda
data/human2Mouse.rda
data/immunePathways.rda
data/majorCellTypes.rda
data/oncogenicPathways.rda
data/plierResult.rda
data/svmMarkers.rda
data/usoskinRes.rda
data/vacData.rda
data/xCell.rda
inst/doc/.Rhistory
inst/doc/missfont.log
inst/doc/vignette.R
inst/doc/vignette.Rnw
inst/doc/vignette.log
inst/doc/vignette.synctex.gz
knitrDoc.Rnw
man/.Rhistory
man/CTNNB1mut.Rd man/DataSmooth.Rd man/HCCData.Rd man/ListPriors.Rd man/PLIER.Rd man/PLIERsparse.Rd man/SPVs.Rd man/VarianceExplained.Rd man/bloodCellMarkersIRISDMAP.Rd man/canonicalPathways.Rd man/chemgenPathways.Rd man/combinePaths.Rd man/commonRows.Rd man/computeChat.Rd man/getCutoff.Rd man/immunePathways.Rd man/mapPathway.Rd man/nameB.Rd man/num.pc.Rd man/oncogenicPathways.Rd man/plierResToMarkers.Rd man/plotMat.Rd man/plotTopZ.Rd man/plotTopZallPath.Rd man/plotU.Rd man/projectPLIER.Rd man/rotateSVD.Rd man/rowNorm.Rd man/simpleDecomp.Rd man/svmMarkers.Rd man/vacData.Rd man/xCell.Rd
vignette.html
vignettes/vignette.Rnw
vignettes/vignette.pdf
wgmao/PLIER documentation built on Sept. 1, 2024, 10:25 p.m.