centerDosage: Centers dosage matrix
In wolfemd/genomicMateSelectR: Genomic Mate Selection
centerDosage R Documentation
Centers dosage matrix
Description
Centers dosage matrix, e.g. for use in whole-genome regressions like rrBLUP
Usage
centerDosage(M)
Arguments
M
dosage matrix. Assumes SNPs in M coded 0, 1, 2 (requires rounding dosages to integers). M is Nind x Mrow, numeric matrix, with row/columanes to indicate SNP/ind ID
See Also
Other helper:
backsolveSNPeff(),
crosses2predict(),
dose2domDevGenotypic(),
dose2domDev(),
effectsArray2list(),
genmap2recombfreq(),
genoVarCovarMatFunc(),
getAF(),
getMAF(),
getPropHom(),
intensity(),
kinship(),
maf_filter(),
quadform(),
remove_invariant()
wolfemd/genomicMateSelectR documentation built on July 1, 2022, 10:42 p.m.
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| centerDosage | R Documentation |
Centers dosage matrix
Description
Centers dosage matrix, e.g. for use in whole-genome regressions like rrBLUP
Usage
centerDosage(M)
Arguments
M |
dosage matrix. Assumes SNPs in M coded 0, 1, 2 (requires rounding dosages to integers). M is Nind x Mrow, numeric matrix, with row/columanes to indicate SNP/ind ID |
See Also
Other helper:
backsolveSNPeff(),
crosses2predict(),
dose2domDevGenotypic(),
dose2domDev(),
effectsArray2list(),
genmap2recombfreq(),
genoVarCovarMatFunc(),
getAF(),
getMAF(),
getPropHom(),
intensity(),
kinship(),
maf_filter(),
quadform(),
remove_invariant()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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