curateTrialsByTrait: Fits mixed-models to each trial and all traits, removing...
In wolfemd/genomicMateSelectR: Genomic Mate Selection
curateTrialsByTrait R Documentation
Fits mixed-models to each trial and all traits, removing outliers
Description
NOT CURRENTLY IN USE / PROBABLY DEPRECATED
Usage
curateTrialsByTrait(nestedTrialData, traits)
Arguments
traits
Details
Fits mixed-models across trials and removes outliers. Returns de-regressed BLUPs and more.
NOTICE: This function is part of a family of functions ("cassavabase_pheno_pipeline") developed as part of the NextGen Cassava Breeding Project genomic selection pipeline.
For some examples of their useage:
See Also
Other cassavabase_pheno_pipeline:
calcPropMissing(),
curateTrialOneTrait(),
detectExptDesigns(),
fitMultiTrialModel(),
makeTrialTypeVar(),
nestByTrials(),
nestDesignsDetectedByTraits(),
nestForMultiTrialAnalysis(),
nestTrialsByTrait(),
readDBdata(),
renameAndSelectCols()
wolfemd/genomicMateSelectR documentation built on July 1, 2022, 10:42 p.m.
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| curateTrialsByTrait | R Documentation |
Fits mixed-models to each trial and all traits, removing outliers
Description
NOT CURRENTLY IN USE / PROBABLY DEPRECATED
Usage
curateTrialsByTrait(nestedTrialData, traits)
Arguments
traits |
Details
Fits mixed-models across trials and removes outliers. Returns de-regressed BLUPs and more.
NOTICE: This function is part of a family of functions ("cassavabase_pheno_pipeline") developed as part of the NextGen Cassava Breeding Project genomic selection pipeline.
For some examples of their useage:
See Also
Other cassavabase_pheno_pipeline:
calcPropMissing(),
curateTrialOneTrait(),
detectExptDesigns(),
fitMultiTrialModel(),
makeTrialTypeVar(),
nestByTrials(),
nestDesignsDetectedByTraits(),
nestForMultiTrialAnalysis(),
nestTrialsByTrait(),
readDBdata(),
renameAndSelectCols()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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