plot_stat_violin: plot Violin plot of sd CV or mean

In wolski/prolfqua: Proteomics Label Free Quantification

plot Violin plot of sd CV or mean

Description

plot Violin plot of sd CV or mean

Usage

plot_stat_violin(pdata, config, stat = c("CV", "meanAbundance", "sd"))

Arguments

pdata	data.frame
config	AnalysisConfiguration
stat	either CV, mean or sd

See Also

Other stats: INTERNAL_FUNCTIONS_BY_FAMILY, lfq_power_t_test_proteins(), lfq_power_t_test_quantiles(), lfq_power_t_test_quantiles_V2(), plot_stat_density(), plot_stat_density_median(), plot_stat_violin_median(), plot_stdv_vs_mean(), pooled_V2(), summarize_stats()

Examples

bb1 <- prolfqua::sim_lfq_data_peptide_config()
config <- bb1$config
data <- bb1$data
res <- summarize_stats(data, config)
res <- summarize_stats(data, config)
plot_stat_violin(res, config, stat = "meanAbundance")
plot_stat_violin(res, config, stat = "sd")
plot_stat_violin(res, config, stat = "CV")

wolski/prolfqua documentation built on Oct. 31, 2024, 9:22 a.m.