plot_stat_violin_median: plot Violin plot of sd CV or mean given intensity lower or...

In wolski/prolfqua: Proteomics Label Free Quantification

plot Violin plot of sd CV or mean given intensity lower or above median

Description

plot Violin plot of sd CV or mean given intensity lower or above median

Usage

plot_stat_violin_median(pdata, config, stat = c("CV", "meanAbundance", "sd"))

Arguments

pdata	data.frame
config	AnalysisConfiguration
stat	either CV, mean or sd

See Also

Other stats: INTERNAL_FUNCTIONS_BY_FAMILY, lfq_power_t_test_proteins(), lfq_power_t_test_quantiles(), lfq_power_t_test_quantiles_V2(), plot_stat_density(), plot_stat_density_median(), plot_stat_violin(), plot_stdv_vs_mean(), pooled_V2(), summarize_stats()

Examples

bb1 <- prolfqua::sim_lfq_data_peptide_config()
config <- bb1$config
data <- bb1$data
res <- summarize_stats(data, config)
plot_stat_violin_median(res, config, stat = "meanAbundance")

wolski/prolfqua documentation built on May 12, 2024, 10:16 p.m.