remove_small_intensities: Remove rows when intensity lower then threshold

In wolski/prolfqua: Proteomics Label Free Quantification

Remove rows when intensity lower then threshold

Description

Remove rows when intensity lower then threshold

Usage

remove_small_intensities(pdata, config, threshold = 1)

Arguments

pdata	data.frame
config	AnalysisConfiguration

Value

data.frame

See Also

Other filtering: remove_large_QValues()

Examples

dd <- prolfqua_data('data_spectronautDIA250_A')
config <- dd$config_f()
analysis <- dd$analysis(dd$data,config)

config$table$get_response()

res1 <- remove_small_intensities(analysis, config, threshold=1 )
res1000 <- remove_small_intensities(analysis, config, threshold=1000 )
stopifnot(nrow(res1) >  nrow(res1000))

wolski/prolfqua documentation built on May 12, 2024, 10:16 p.m.