API for wrightrc/r1001genomes
Access and analyze the 1001 genomes Arabidopsis resequencing dataset
| Global functions | |
|---|---|
| .approxRefGt | Source code |
| .relableTairSymbol | Source code |
| Nucleotide_diversity | Man page |
| VCFByTranscript | Man page |
| VCFList | Man page |
| addAccDetails | Man page |
| addAlnPosToAnno | Man page |
| addSNPsToAlnDF | Man page |
| alignCDS | Man page |
| chunkAlnDF | Man page |
| chunkAnnotation | Man page |
| diversityStats | Man page |
| geneInfoFromFile | Man page Source code |
| geneInfoFromGff | Man page Source code |
| geom_str_align | Man page |
| getCodingDiv | Man page |
| getGeneInfo | Man page |
| labelBySNPs | Man page |
| makeAlnDF | Man page |
| makeChunksDF | Man page |
| parseEFF | Man page |
| plotCodingDiv | Man page |
| promoterVariantToString | Man page |
| readAnnotationFile | Man page |
| run1001genomes | Man page Source code |
| variantCounts | Man page |
