chunkAlnDF: Chunk up an alignment data frame to allow facetting over...
In wrightrc/r1001genomes: Access and analyze the 1001 genomes Arabidopsis resequencing dataset
Description
Usage
Arguments
Value
Examples
Description
Chunk up an alignment data frame to allow facetting over
multiple rows
Usage
1
chunkAlnDF(aln_df, chunk_width = 80)
Arguments
aln_df
An alignment data frame
chunk_width
The number of units (bp or aa) in a chunk.
Value
aln_df with the addition of a chunk column for
wrapping the alignment across facets
Examples
1
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5
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#' # make an alignment
IDs <- c("AT3G62980.1", "AT3G26810.1")
alignment <- alignCDS(IDs)
# make an alignment data frame
aln_df <- makeAlnDF(alignment[[2]])
chunkAlnDF(aln_df)
wrightrc/r1001genomes documentation built on Nov. 10, 2019, 12:45 p.m.
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Description Usage Arguments Value Examples
Description
Chunk up an alignment data frame to allow facetting over multiple rows
Usage
1 | chunkAlnDF(aln_df, chunk_width = 80)
|
Arguments
aln_df |
An alignment data frame |
chunk_width |
The number of units (bp or aa) in a chunk. |
Value
aln_df with the addition of a chunk column for
wrapping the alignment across facets
Examples
1 2 3 4 5 6 | #' # make an alignment
IDs <- c("AT3G62980.1", "AT3G26810.1")
alignment <- alignCDS(IDs)
# make an alignment data frame
aln_df <- makeAlnDF(alignment[[2]])
chunkAlnDF(aln_df)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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