Export.PeakSummary: Export.PeakSummary
In xia-lab/OptiLCMS: Optimized LC-MS Spectra Processing

Description Usage Arguments Value Author(s) See Also Examples

Export.PeakSummary is used to export the result of peak' summary

1	Export.PeakSummary(mSet = NULL, path = getwd())

`mSet`	mSet object, processed by FormatPeakList.
`path`	character, used to specify the path for result rds and csv file. Default is the working directory.#'

will save peak_result_summary.txt into working path

Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca, Jeff Xia jeff.xia@mcgill.ca

ExecutePlan and PerformPeakProfiling for the whole pipeline.

data(mSet);
Export.PeakSummary(mSet, path = tempdir());
# delete the exported files from the tempdir with unlink
unlink(paste0(tempdir(),"/peak_result_summary.txt"), recursive = TRUE, force = TRUE)