PerformPeakFiling: PerformPeakFiling

In xia-lab/OptiLCMS: Optimized LC-MS Spectra Processing

PerformPeakFiling

Description

PerformPeakFiling

Usage

PerformPeakFiling(mSet, BPPARAM = bpparam())

Arguments

mSet	the mSet object generated by PerformPeakPicking function.
BPPARAM	parallel method used for data processing. Default is bpparam().

Value

will return an mSet object with peak gaps filled

Author(s)

Zhiqiang Pang, Jeff Xia [e-mail] McGill University, Canada License: GNU GPL (>= 2)

References

Smith, C.A. et al. 2006. Analytical Chemistry, 78, 779-787

Examples

data(mSet);
newPath <- dir(system.file("mzData", package = "mtbls2"),
               full.names = TRUE, recursive = TRUE)[c(10, 11, 12)]
mSet <- updateRawSpectraPath(mSet, newPath);
SetGlobalParallel(1);
mSet <- PerformPeakFiling(mSet);
register(bpstop());

xia-lab/OptiLCMS documentation built on Nov. 26, 2024, 3:50 a.m.