PerformPeakFiling: PerformPeakFiling

Description Usage Arguments Value Author(s) References Examples

View source: R/Spectra_Utils.R

Description

PerformPeakFiling

Usage

1
PerformPeakFiling(mSet, BPPARAM = bpparam())

Arguments

mSet

the mSet object generated by PerformPeakPicking function.

BPPARAM

parallel method used for data processing. Default is bpparam().

Value

will return an mSet object with peak gaps filled

Author(s)

Zhiqiang Pang, Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)

References

Smith, C.A. et al. 2006. Analytical Chemistry, 78, 779-787

Examples

1
2
3
4
5
6
7
data(mSet);
newPath <- dir(system.file("mzData", package = "mtbls2"),
               full.names = TRUE, recursive = TRUE)[c(10, 11, 12)]
mSet <- updateRawSpectraPath(mSet, newPath);
SetGlobalParallel(1);
mSet <- PerformPeakFiling(mSet);
register(bpstop());

xia-lab/OptiLCMS documentation built on Sept. 6, 2021, 12:36 a.m.