PerformPeakPicking: PerformPeakPicking

In xia-lab/OptiLCMS: Optimized LC-MS Spectra Processing

PerformPeakPicking

Description

This funciton is used to Perform Peak Picking on an object generated by ImportRawMSdata

Usage

PerformPeakPicking(mSet, BPPARAM = bpparam())

Arguments

mSet	the raw data object read by ImportRawMSData function.
BPPARAM	parallel method used for data processing. Default is bpparam(). Optional.

Value

will return an mSet object with peaks picked

Author(s)

Zhiqiang Pang, Jeff Xia [e-mail] McGill University, Canada License: GNU GPL (>= 2)

References

Smith, C.A. et al. 2006. Analytical Chemistry, 78, 779-787

Examples

data(mSet);
newPath <- dir(system.file("mzData", package = "mtbls2"),
               full.names = TRUE, recursive = TRUE)[c(10, 11, 12)]
mSet <- updateRawSpectraPath(mSet, newPath);
# mSet <- PerformPeakPicking(mSet);

xia-lab/OptiLCMS documentation built on Nov. 26, 2024, 3:50 a.m.