plotHC: Plot the dendrogram tree of hierarchical clustering

Description Usage Arguments Details

Description

Plot the dendrogram tree of hierarchical clustering

Usage

1
plotHC(object, horiz = FALSE, show.labels = FALSE, do.radial = FALSE, ...)

Arguments

object

A sincera object with the hc.obj slot stored the dendrogram

horiz

If TRUE, plot the dendrogram tree with tips turned right

show.labels

If TRUE, show the labels of leafs

do.radial

IF TRUE, plot the dendrogram tree using radial layout

Details

When do.radial is FALSE, the plotting uses plot(); one can use pdf(), tiff(), or other similar functions to save plots to files when needed when do.radial is TRUE, the plotting uses ggplot2:ggplot(); one can use ggsave() to save plots to files.


xu-lab/SINCERA documentation built on Feb. 3, 2021, 4:19 a.m.