adj2igraph: Adjacency to igraph

In zdk123/SpiecEasi: Sparse Inverse Covariance for Ecological Statistical Inference

Adjacency to igraph

Description

Convert an adjacency matrix (ie - from the sparseiCov function) to an igraph object

Usage

adj2igraph(
  Adj,
  rmEmptyNodes = FALSE,
  diag = FALSE,
  edge.attr = list(),
  vertex.attr = list(name = 1:ncol(Adj))
)

Arguments

Adj	an Adjacency matrix
rmEmptyNodes	should unconnected nodes be removed from the graph
diag	Flag to include self-loops (diagonal of adjacency matrix)
edge.attr	named list of attributes for graph edges
vertex.attr	named list of attributes for graph vertices

zdk123/SpiecEasi documentation built on Oct. 20, 2023, 6:49 a.m.