neighborhood.net: Neighborhood net estimates

In zdk123/SpiecEasi: Sparse Inverse Covariance for Ecological Statistical Inference

Neighborhood net estimates

Description

Select a sparse inverse covariance matrix using neighborhood selection and glmnet from various exponential models.

Usage

neighborhood.net(data, lambda, method = "ising", ncores = 1, sym = "or", ...)

Arguments

data	n x p input (pre-transformed) data
lambda	the lambda path
method	ising and poisson models currently supported.
ncores	number of cores for distributing the model fitting
sym	symmetrize the neighborhood using the 'or' (default)/'and' rule
...	further arguments to glmnet

zdk123/SpiecEasi documentation built on Oct. 20, 2023, 6:49 a.m.