addAnchorMatrix: Add some prefixed sequence to existing energy matrix

In zeropin/TFCookbook: Analyzing protein-DNA interactions data in principled way

Add some prefixed sequence to existing energy matrix

Description

Add some prefixed sequence to existing energy matrix

Usage

addAnchorMatrix(PEM = NULL, anchor, position = 1, height = 0.2)

Arguments

PEM	existing Energy Matrix
anchor	The prefixed sequence
position	The starting position of the prefixed sequence
height	The height of prefixed sequence, which determines how it looks at energy logo.

Value

Energy matrix with some prefixed sequence at designated position

Examples

addAnchorMatrix(PEM, anchor = "TAGC", position = 2, height = 0.25)

zeropin/TFCookbook documentation built on July 8, 2023, 2:59 p.m.