composeMotif: Build composite motif based on two existing motifs with...
In zeropin/TFCookbook: Analyzing protein-DNA interactions data in principled way
View source: R/matrix_functions.R
composeMotif R Documentation
Build composite motif based on two existing motifs with specified configurations
Description
Build composite motif based on two existing motifs with specified configurations
Usage
composeMotif(motifA, motifB, configuration = "F0F", type = "PEM")
Arguments
motifA
The first motif (PEM by default)
motifB
The second motif (PEM by default)
configuration
"F0F" by default, i.e., Forward-0bp gap-Forward orientation
Value
compositeMotif constructed from motifA and motifB
Examples
buildCompositeMotif(SOX2.matrix, Oct4.matrix, configuration = "F0F")
zeropin/TFCookbook documentation built on July 8, 2023, 2:59 p.m.
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View source: R/matrix_functions.R
| composeMotif | R Documentation |
Build composite motif based on two existing motifs with specified configurations
Description
Build composite motif based on two existing motifs with specified configurations
Usage
composeMotif(motifA, motifB, configuration = "F0F", type = "PEM")
Arguments
motifA |
The first motif (PEM by default) |
motifB |
The second motif (PEM by default) |
configuration |
"F0F" by default, i.e., Forward-0bp gap-Forward orientation |
Value
compositeMotif constructed from motifA and motifB
Examples
buildCompositeMotif(SOX2.matrix, Oct4.matrix, configuration = "F0F")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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