hlaAlleleClass: Class of HLA Type
In HIBAG: HIBAG -- HLA Genotype Imputation with Attribute Bagging
Description
Value
Author(s)
See Also
Description
The definition of a class for HLA types, returned from
hlaAllele.
Value
There are following components:
locus
HLA locus
pos.start
the starting position in basepair
pos.end
the end position in basepair
value
a data frame
assembly
the human genome reference, such like "hg19"
postprob
a matrix of all posterior probabilities
The component value includes:
sample.id
sample ID
allele1
HLA allele
allele2
HLA allele
prob
the posterior probability
Author(s)
Xiuwen Zheng
See Also
HIBAG documentation built on May 2, 2019, 4:50 p.m.
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Description Value Author(s) See Also
Description
The definition of a class for HLA types, returned from
hlaAllele.
Value
There are following components:
locus |
HLA locus |
pos.start |
the starting position in basepair |
pos.end |
the end position in basepair |
value |
a data frame |
assembly |
the human genome reference, such like "hg19" |
postprob |
a matrix of all posterior probabilities |
The component value includes:
sample.id |
sample ID |
allele1 |
HLA allele |
allele2 |
HLA allele |
prob |
the posterior probability |
Author(s)
Xiuwen Zheng
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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