hlaGenoAFreq: Allele Frequency
In HIBAG: HIBAG -- HLA Genotype Imputation with Attribute Bagging
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
To calculate the allele frequencies from genotypes or haplotypes.
Usage
1
hlaGenoAFreq(obj)
Arguments
obj
an object of hlaSNPGenoClass or
hlaSNPHaploClass
Value
Return allele frequecies.
Author(s)
Xiuwen Zheng
See Also
hlaGenoAFreq, hlaGenoMFreq,
hlaGenoMRate, hlaGenoMRate_Samp
Examples
1
2
3
4
5
6
# load SNP genotypes
data(HapMap_CEU_Geno, package="HIBAG")
summary(HapMap_CEU_Geno)
summary(hlaGenoAFreq(HapMap_CEU_Geno))
HIBAG documentation built on May 2, 2019, 4:50 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
To calculate the allele frequencies from genotypes or haplotypes.
Usage
1 | hlaGenoAFreq(obj)
|
Arguments
obj |
an object of |
Value
Return allele frequecies.
Author(s)
Xiuwen Zheng
See Also
hlaGenoAFreq, hlaGenoMFreq,
hlaGenoMRate, hlaGenoMRate_Samp
Examples
1 2 3 4 5 6 | # load SNP genotypes
data(HapMap_CEU_Geno, package="HIBAG")
summary(HapMap_CEU_Geno)
summary(hlaGenoAFreq(HapMap_CEU_Geno))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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