GCnorm: Replace slot GCnorm

Description Arguments Details Author(s) References

Description

changes slot GCnorm of a CGHoptions object

Arguments

.Object

an object of the CGHoptions class

Details

CGHo["GCnorm"] determines if the bias due to GC content should be removed from the data: "linear" for linear regression (degree 2) "none" for no correction

Author(s)

F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin

References

Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)


cghseg documentation built on May 2, 2019, 4:43 p.m.

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