Description Usage Arguments Value Author(s) References Examples
Segmentation of univariate CGH profiles
1 |
.Object |
an object of the CGHdata class |
CGHo |
an object of the CGHoption class |
uniKmax |
list containing the maximum number of segments per profile. If !is.null(uniKmax) in the entry of the method, the method checks its validity. |
CGHr |
object of class CGHresult |
F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin
Joint segmentation, calling and normalization of multiple CGH profiles, Picard et al. Biostatistics (2011), Pruned dynamic programming for optimal multiple change-point detection, G. Rigaill, arXiv preprint arXiv:1004.0887 (2010)
1 2 3 4 5 | #set.seed(1)
#simul = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd = new("CGHdata",Y=simul$Y)
#CGHo = new("CGHoptions")
#CGHr = uniseg(CGHd,CGHo)
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